2D hierarchical clustering reveals
interesting patterns inherent in the data
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The Gene Ontology Annotation Tool lets you examine
the functions of your favorite gene list
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PCA analysis on array directly reveals good separation
of cell types
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The set of 50 genes separate samples into DLBCL-alive,
DLBCL-dead and a third group.
Number of samples analyzed:
DLBCL-alive = 28
DLBCL-dead = 32
Germinal centre B = 3
Activated blood B = 12
Resting/activated T = 6
FL = 9
CLL = 12
Transformed cell lines = 6
NI.lymph node/tonsil = 4
Resting blood B = 6
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Examine the three groups,
which reveals the molecular heterogeneity of DLBCL, determining the chance
of survival
The left tree (pink-colored tree) contains mostly DLBCL-alive, FL, NI.lymph
node/tonsil samples.
The right tree (top red and bottom green tree) contains mostly DLBCL-dead,
resting/activated T, transformed cell lines samples.
The middle tree (green color top to bottom) contains mostly activated blood
B, CLL, resting blood B samples.
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